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Senior Director, Protein Analytics & Biophysics

  • Generate Biomedicines

    • On-site
    • Somerville, MA

Senior Machine Learning Scientist I

  • Generate Biomedicines

    • On-site
    • Somerville, MA

Clinical Trial Manager

  • Generate Biomedicines

    • Remote
    • Massachusetts

1–3 of 3 jobs

Senior Director, Protein Analytics & Biophysics

  • Generate Biomedicines

  • Somerville, MA 02143
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On-site

Not Disclosed

Bio-Pharma

R&D

  • Posted on:

Job Description

Summary

This role will own the continued excellence of conventional protein analytics, developability, and protein-protein interaction technologies while building the next generation of at-scale experimental systems. The ideal candidate brings deep technical breadth, a quantitative mindset, and a clear point of view on how pooled assays, DNA/barcode-enabled readouts, synthetic biology, automation, microfluidics, advanced detection, and computational modeling can transform how protein therapeutics are evaluated.


Responsibilities
  • Set and drive the multi-year scientific and organizational vision for Protein Analytics & Biophysics, aligning functional strategy with Generate's platform, portfolio, and company priorities.
  • Define the next generation of biophysical, biochemical, developability, and protein-protein interaction measurement capabilities for protein therapeutics, with a particular focus on miniaturized, pooled, high-throughput, and nanoscale approaches.
  • Lead the continued evolution of conventional analytical and interaction workflows, including HPLC/UPLC, LC/MS, electrophoretic, thermal stability, light scattering, plate-based, and biosensor-based platforms, ensuring rigor, reproducibility, and decision relevance.
  • Build a strategy that connects conventional analytical and biosensor technologies with emerging pooled or massively multiplexed approaches, enabling Generate to measure protein attributes at scales that match the output of generative design.
  • Partner with Prototyping, Technology, Automation, Data Sciences, Machine Learning, Protein Sciences, Biology, and CMC/Tech Ops to design, operationalize, validate, and scale new assay concepts into production-quality capabilities.
  • Identify, evaluate, and implement external and internal technologies that can unlock smaller sample volumes, richer attribute profiles, higher throughput, improved sensitivity, or new classes of protein interaction and developability data.
  • Establish data standards, quality expectations, assay controls, and analytical frameworks that allow high-throughput measurements to be used confidently for model training, candidate triage, and program decision-making.
  • Ensure the function generates high-quality, decision-enabling data across Discovery, Candidate Selection, and early Development, including developability, stability, specificity, affinity, kinetics, and manufacturability-relevant attributes.


Qualifications
  • Ph.D. in Biophysics, Biochemistry, Molecular Biology, Chemical Biology, Bioengineering, Synthetic Biology, Protein Engineering, or a related scientific discipline; or equivalent depth of industry experience.
  • 12+ years experience in biopharma, biotechnology, synthetic biology, protein engineering, or a related field, with substantial leadership experience in protein analytics, biophysics, developability, and protein-protein interaction characterization. 
  • Significant progressive experience in biopharma, biotechnology, synthetic biology, protein engineering, or a related field, with substantial leadership experience in protein analytics, biophysics, developability, and protein-protein interaction characterization.
  • A track record of building, inventing, or scaling novel assay platforms for protein therapeutics, especially miniaturized, pooled, multiplexed, microfluidic, barcode-enabled, sequencing-enabled, cell-based, or nanoscale biophysical or biochemical measurements.
  • Demonstrated ability to move beyond single-sample, low-throughput paradigms and create experimental systems that generate high-dimensional, quantitative data at the scale needed for AI/ML-enabled protein design.
  • Deep technical expertise across conventional analytical and biophysical methods, such as HPLC/UPLC (SEC, RP, HIC, IEX), LC/MS, CE-SDS, cIEF, DSF, DSC, DLS, SEC-MALS, SPR, BLI, and related technologies.
  • Strong understanding of protein-protein interaction measurement, including affinity, kinetics, specificity, cross-reactivity, epitope/binning, avidity, and context-dependent binding behavior.
  • Strong quantitative mindset and experience using data quality, assay statistics, modeling, and informatics to shape scientific strategy, technology investment, and operational decision-making.
  • Experience partnering closely with prototyping, automation, engineering, computational, and technology teams to translate exploratory assay concepts into robust, reproducible, and scalable capabilities.
  • Demonstrated success as a senior people leader, including leading leaders, developing senior scientific talent, and scaling high-performing teams through periods of change.
  • Exceptional collaboration and communication skills, with a clear track record of influencing across complex, matrixed organizations and engaging executive stakeholders with clarity, candor, and credibility.
  • Experience advancing biologics programs across Discovery and early Development, with an understanding of developability considerations, candidate selection, and downstream impact.


Education

Degree

PhD

Specialization

Biochemistry/Molecular Biology/Chemical Biology
Experience:

13-16 yrs

  • Skills:
  • Protein Analytics
  • Protein-Protein Interaction Analysis
  • Machine Learning-enabled Drug Discovery
  • Stakeholders with clarity, candor, and credibility
  • Job Type:
  • Full-time
  • Shift Type:
  • Day shift
  • Monday to Friday
  • 8 hour shift

Compensation

  • Benefits:
  • 401K
  • 401K Match
  • Medical, Dental, Vision
  • Additional:
  • Base Salary

Job ID:

CGXP_26_14025

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